Human FBXW7 Knockout Cell Line-DLD-1

Human FBXW7 Knockout Cell Line-DLD-1

Cat.No. : CSC-RT0018

Host Cell: DLD-1 Target Gene: FBXW7

Size: 1x10^6 cells/vial, 1mL Validation: Sequencing

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Cell Line Information

Cell Culture Information

Safety and Packaging

Cat. No. CSC-RT0018
Cell Line Information DLD-1-FBXW7 (-/-) is a cell line with a homozygous knockout of human FBXW7
Target Gene FBXW7
Host Cell DLD-1
Species Homo sapiens (Human)
Revival Rapidly thaw cells in a 37°C water bath. Transfer contents into a tube containing pre-warmed media. Centrifuge cells and seed into a 25 cm2 flask containing pre-warmed media.
Mycoplasma Negative
Format One frozen vial containing millions of cells
Storage Liquid nitrogen
Safety Considerations

The following safety precautions should be observed.

1. Use pipette aids to prevent ingestion and keep aerosols down to a minimum.

2. No eating, drinking or smoking while handling the stable line.

3. Wash hands after handling the stable line and before leaving the lab.

4. Decontaminate work surface with disinfectant or 70% ethanol before and after working with stable cells.

5. All waste should be considered hazardous.

6. Dispose of all liquid waste after each experiment and treat with bleach.

Ship Dry ice
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Background

Case Study

Applications

FBXW7, also known as F-box/WD repeat protein 7, is an essential component of the SCF (Skp1-Cul1-F-box protein) ubiquitin ligase complex. This protein complex plays important roles in cellular processes by promoting ubiquitination and subsequent proteasomal degradation of specific substrate proteins. FBXW7 is characterized by the presence of an F-box domain, which is responsible for binding to Skp1, and multiple WD40 repeats that mediate substrate recognition. By targeting various substrates for degradation, FBXW7 regulates key cellular functions, including cell cycle progression, cell growth, and apoptosis. It functions as a tumor suppressor by controlling the stability of several oncogenic proteins, such as cyclin E, c-Myc, Notch1, and mTOR. The importance of FBXW7 in cancer biology lies in the fact that this gene is frequently mutated in multiple types of cancer, including colorectal, breast, and liver cancers. Mutations often impair its substrate binding ability, leading to the accumulation of oncogenic proteins and uncontrolled cell proliferation. This suggests that dysfunctional FBXW7 can significantly promote tumorigenesis. Recent studies have also shown that FBXW7 plays a role in metabolic homeostasis, highlighting its multifaceted impact on human health. In addition, FBXW7 is emerging as a potential therapeutic target. Compounds that restore mutant FBXW7 function or enhance its activity could provide new avenues for cancer treatment.

The tumor suppressor p53 plays a key role in integrating multiple stress responses. Therefore, p53 levels are precisely regulated by multiple ubiquitin ligases. In the study, researchers found that FBXW7, a substrate recognition component of the SKP1-CUL1-F-box (SCF) E3 ligase, interacts with p53 and targets p53 for polyubiquitination and proteasomal degradation after exposure to ionizing radiation or etoposide. Mechanistically, DNA damage activates ATM to phosphorylate p53 on Ser33 and Ser37, thereby promoting FBXW7 binding and subsequent degradation of p53 by SCFFBXW7. Inactivation of ATM or SCFFBXW7 by small molecule inhibitors or genetic knockdown/knockout approaches prolongs p53 protein half-life after DNA damage in an MDM2-independent manner. Biologically, FBXW7 inactivation stabilizes p53 to induce cell cycle arrest and apoptosis, thereby sensitizing cancer cells to radiation or etoposide. In conclusion, this study elucidates the mechanism by which FBXW7 confers cancer cell survival during radiotherapy or chemotherapy through p53 targeting.

In HCT116 FBXW7 knockout cells, ectopic expression of wild-type FBXW7, but not FBXW7-ΔF or R479L mutants, accelerated the turnover of p53 by shortening its protein half-life (Figure 1B). Since polyubiquitination is required for proteins destined for degradation via the ubiquitin-proteasome system (UPS), researchers next examined whether FBXW7 promoted polyubiquitination of p53 using an in vivo ubiquitination assay. Indeed, researchers found that FBXW7 promoted polyubiquitination of ectopically expressed p53 in H1299 cells in which MDM2 had been depleted by CRISPR-Cas9 (Figure 1C). Direct immunoblotting (IB) showed that polyubiquitination of endogenous p53 was also consistently reduced in FBXW7 knockout or FBXW7-depleted cells (Figure 1D). Finally, polyubiquitination of FLAG-p53(S33D/S37D) was readily detected in an in vitro ubiquitination assay in the presence of E1, E2, and SCFFBXW7, but not the SCFFBXW7-ΔF complex in the presence of E3 (Figure 1E). Taken together, these results suggest that FBXW7 targets p53 for polyubiquitination and subsequent degradation via the UPS.

Figure 1. FBXW7 Shortens the p53 Half-Life and Promotes p53 Ubiquitination.Figure 1. FBXW7 Shortens the p53 Half-Life and Promotes p53 Ubiquitination. (Cui D, et al., 2020)

Applications of Human FBXW7 Knockout Cell Line-DLD-1 Cancer Research: FBXW7 is a tumor suppressor often mutated in various cancers. DLD-1 cells are a colorectal carcinoma cell line, making this knockout model particularly relevant for studying colorectal cancer. Researchers can investigate how FBXW7 loss contributes to tumor development, progression, and metastasis. Drug Screening: The knockout cell line can be used in high-throughput screening to identify small molecules or drugs that can selectively kill FBXW7-deficient cells, providing potential therapeutic avenues for FBXW7-mutant cancers. Signal Transduction Studies: Understanding the role of FBXW7 in cell signaling pathways such as Notch, mTOR, and c-Myc. Gene Function Studies: Comparing gene expression profiles between wild-type and FBXW7 knockout DLD-1 cells can reveal the downstream effects and functional outcomes of FBXW7 loss. Biomarker Discovery: Using FBXW7 knockout DLD-1 cells can assist in identifying potential biomarkers for predicting the response to therapies, particularly in colorectal cancer patients harboring FBXW7 mutations.

For research use only. Not intended for any clinical use.
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