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Protocols

protocols
Protocol

PERT Assay Protocol

Experiment Tags: PERT Assay, Product-enhanced RT

Experiment Summary: Sensitivity was greatly increased when a PCR amplification step of the synthesized cDNA was introduced prior to product detection. These types of assays are known as product-enhanced RT (PERT) assays.

protocols
Protocol

Limiting Dilution Protocol

Experiment Tags: Dilution, Cell

Experiment Summary: Limiting dilution analysis attempts to determine the frequency of cells having a particular function that are present in a mixed population of cells. So limiting dilution analysis is an easy-operated method that used to measure the abundance of cells able to perform a particular function.

protocols
Protocol

Lentivirus Transduction Protocol

Experiment Tags: Lentivirus, Lentivirus Transduction

Experiment Summary: Lentivirus is a modified HIV virus that must be handled with caution although it cannot replicate in a host.

protocols
Protocol

Designing sgRNA using CRISPR Protocol

Experiment Tags: sgRNA, CRISPR

Experiment Summary: Selection of sgRNAs for an experiment needs to balance two aspects: maximizing on-target activity while minimizing off-target activity, which sounds obviously but can often require thorough decisions.

protocols
Protocol

Gene Overexpression in Cell Lines Protocol

Experiment Tags: Cell, Cell Line

Experiment Summary: The fundamental principle is to add regulatory elements to the upstream of the target gene through artificial construction, so that genes can be transcribed and translated efficiently under controlled conditions.

protocols
Protocol

Fosmid Library Construction Protocol

Experiment Tags: Fosmid Library, Library, Library Construction

Experiment Summary: The fosmid system has been widely used in the construction of large-insert genomic libraries. Fosmid clones are similar in insert size comparing with cosmid clones and smaller than that in BAC and yeast artificial chromosomes (YAC).

protocols
Protocol

CRISPR Plasmid Transfection Protocol

Experiment Tags: CRISPR, CRISPR Plasmid

Experiment Summary: The CRISPR/Cas9 system has two critical parts: sgRNA sequence and Cas9 sequence. These two sequences could be cloned into separated plasmids or combined into one plasmid, each format has its own set of advantages and shares a similar delivery procedure.

protocols
Protocol

Codon Optimization Protocol

Experiment Tags: Codon Optimization, Codon

Experiment Summary: Codon optimization is one of the key steps in achieving the high level expression of target gene. There are some key factors for consideration including transcription efficiency, translation efficiency, gene synthesis and protein folding.

protocols
Protocol

Baculovirus Expression Protocol

Experiment Tags: Baculovirus, Baculovirus expression vector system, BEVS

Experiment Summary: BEVS is recognized as a powerful tool for the expression of the large-scale protein on the strength of convenient process, high expression level and the function of post-translational modifications.

protocols
Protocol

ATAC-seq Protocol

Experiment Tags: ATAC-seq, Robust Tn5 Transposase, Tn5 Transposase

Experiment Summary: Sequence the library and correlate reads with open and closed chromatin. When sequencing ATAC-seq libraries, sequencing primers and reagents must be used.

For research use only. Not intended for any clinical use.
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